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ctDNA Analysis for Biomarker Discovery

All products and services are For Research Use Only and CANNOT be used in the treatment or diagnosis of disease.

Circulating tumor DNA (ctDNA) has emerged as a promising biomarker in liquid biopsy for monitoring the disease status of cancer patients. Resulting from tumor cell apoptosis, ctDNA can be used to monitor different cancers by targeting cancer-specific mutations. With Ph.D. level scientists and extensive experience in Immune Biomarker Discovery for Immune Monitoring, Creative Biolabs offers accurate and effective solutions for the analysis of ctDNA in the liquid biopsy to help our clients' biomarker development project.

Introduction of ctDNA

ctDNA is single- or double-stranded DNA released by the tumor cells into the blood, harboring the mutations of the original tumor. ctDNA is a small fraction of the total cell-free (cfDNA) that contains point mutations, rearrangements, amplification, and even gene copy number variations. Previous studies have shown that ctDNA carries genetic information from the entire tumor genome, providing insights into clonal heterogeneity and evolution of all solid cancers present at any one time. Since ctDNA provides detailed information via a minimally invasive 'liquid biopsy', eliminating the morbidity associated with the serial sampling of tumors for monitoring cancer patients, analysis of ctDNA can be tailored for different cancers by targeting specific mutations. Studies have indicated that ctDNA is a promising biomarker that can obtain quantitative and qualitative comprehensive tumor DNA in a minimally invasive manner. It can be potentially used in the early detection of cancer, assessing the risk of postoperative recurrence and monitoring the efficacy of therapy.

The potential origins of ctDNA and the hypothesis of genometastasis. Fig.1 The potential origins of ctDNA and the hypothesis of genometastasis. (Cheng, 2016)

ctDNA Analysis for Biomarker Discovery at Creative Biolabs

With the simultaneous ability to assess numerous genes and numerous tissues, liquid biopsy is suitable for comprehensive genomic profiling. To avoid the limitations of ctDNA liquid biopsies, including false negatives, false positives, low signal-to-noise ratio and short half-life of ctDNA extracted, Creative Biolabs has developed an efficient ctDNA extraction kit, which is designed for rapid extraction of ctDNA using paramagnetic particles. False positives and false negatives can be reduced by maximizing the recovery of 100 bp to 550 bp DNA fragments. With industry-leading expertise and state-of-the-art equipment, Creative Biolabs has pioneered the analysis of ctDNA for Biomarker Discovery.

  • Nucleic acid assay-based ctDNA analysis
  • Creative Biolabs has developed a range of nucleic acid assays to detect mutations in the following genes in breast cancer, lung cancer, and colon cancer.

ctDNA Analysis for Biomarker Discovery

  • Next-generation sequencing (NGS)-based ctDNA analysis
  • NGS makes it possible to detect low levels of ctDNA in the bloodstream with sensitivity and specificity. In addition to detecting a single gene or a subset of genes, NGS can also identify genome-wide tumor-derived alterations in ctDNA.

Potential Applications of ctDNA in Cancer

  • Early diagnosis and detection without an invasive biopsy
  • Measure tumor heterogeneity
  • Monitoring for therapeutic response
  • Monitoring for residual disease
  • Track the number of cancer cells in real-time
  • Determine the presence of disease with no prior evidence

For more detailed information, please feel free to contact us for a detailed quote and further discussion with our scientists.

Reference

  1. Cheng, F.; et al. Circulating tumor DNA: a promising biomarker in the liquid biopsy of cancer. Oncotarget. 2016, 7(30):48832.
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