Purity Detection of Viral Vector

Ensuring the highest level of purity is critical for the safety and efficacy of viral vector-based gene therapies. Creative Biolabs provides comprehensive purity detection services, utilizing advanced analytical technologies to characterize empty/full capsid ratios, host cell impurities, and aggregates.

Viral Vector Purity Detection Introduction

Viral vectors, including Adeno-Associated Virus (AAV), Lentivirus (LV), and Adenovirus (AdV), are sophisticated biological entities produced via complex cell culture and multi-stage purification processes. Due to their biological origin, the final drug product inevitably contains a spectrum of impurities. Purity detection is not merely a regulatory box to check; it is a critical quality attribute (CQA) that directly impacts the safety, potency, and immunogenic profile of gene therapies.

Purity Detection Services Overview

We offer a modular approach to purity testing, allowing clients to select specific assays or a comprehensive panel depending on their development stage.

Capsid Analysis

Empty/Full Capsid

Quantify the ratio of empty, partial, and full capsids to ensure product efficacy using orthogonal methods.

  • Analytical Ultracentrifugation (AUC)
  • Cryo-Electron Microscopy
  • Anion Exchange HPLC
HCP Analysis

Host Impurities

Sensitive detection of residual proteins (HCP) and DNA (HCD) from HEK293, Sf9, or HeLa lines.

  • Process-Specific ELISA
  • LC-MS/MS Proteomics
  • qPCR & ddPCR
Aggregation

Aggregation

Identify high molecular weight aggregates and sub-visible particles that trigger immune responses.

  • SEC-MALS Analysis
  • Dynamic Light Scattering (DLS)
  • Nanoparticle Tracking (NTA)
Safety Testing

Ensuring the absence of adventitious agents and biological contaminants for safety.

  • Endotoxin (LAL)
  • Sterility & Mycoplasma
  • Residual Reagents

Comparison of Detection Methods

Selecting the right method depends on the required sensitivity, throughput, and development phase.

Target Impurity Primary Method Key Advantages
Empty Capsids Analytical Ultracentrifugation (AUC) Matrix-free, high resolution, serotype independent.
Host Cell Proteins (HCP) ELISA / LC-MS/MS ELISA for high throughput; LC-MS for identification of specific immunogenic proteins.
Host Cell DNA (HCD) qPCR / ddPCR Highly sensitive quantification; ddPCR offers absolute quantification without standard curves.
Aggregates SEC-MALS Determines absolute molecular weight and oligomeric state.

Customized Testing Solutions

Recognizing that every viral vector program has unique requirements, we offer modular and fully customized testing suites. Our experts work closely with you to design a matrix-specific validation strategy that aligns with your specific development phase and regulatory goals.

Platform Optimization

Tailored protocols for HEK293 and HeLa manufacturing platforms. These customized methods ensure the most accurate assessment of process-specific impurities while maintaining high recovery and sensitivity for diverse viral vector types.

Regulatory Compliance

Fully compliant with guidelines and international standards. We deliver detailed analytical reports and CoA to facilitate your regulatory filings and ensure the safety of clinical and commercial batch releases.

Start Your Project

Our technical support team is available to discuss your specific testing needs and provide a proposal.

Response within 24 hours

Technical consultation included

Supported Viral Vector Types

Creative Biolabs provides highly customized purity detection programs tailored to the unique structural and biological characteristics of diverse viral delivery systems, ensuring optimal safety and efficacy profiles for your therapeutic candidates.

Adeno-Associated Virus (AAV)

AAV is the gold standard for in vivo gene therapy. Our purity analysis focuses on distinguishing between productive and non-productive particles to optimize dose accuracy.

Full/Empty/Partial Ratio: Precise quantification using AUC and Cryo-EM to reduce immunological load.
Capsid Integrity: Identification of truncated VP1/VP2/VP3 proteins.

Supported Serotypes:

AAV1-AAV9, AAV-rh10, and engineered variants like AAV-PHP.B/eB.

Lentivirus (LV)

Extensively used in ex vivo cell therapies like CAR-T. Given their enveloped nature, purity testing emphasizes host-derived contaminants.

Residual p24:

Detection of unassociated viral proteins.

Host DNA/RNA:

Trace analysis of residual packaging sequences.

VSV-G Levels:

Monitoring envelope protein purity.

Safety Markers:

RCL (Replication Competent Lentivirus) testing.

Adenovirus (AdV)

Primarily utilized for vaccines and transient high-level expression. AdV vectors require rigorous monitoring of particle-to-infectious unit ratios.

  • Hexon/Penton/Fiber Stoichiometry

    Ensuring the correct assembly of major capsid subunits.

  • Total Particle vs. Infectious Titer

    Assessing the specific activity and physical purity of the batch.

Other Advanced Vectors & LNP

Retrovirus

Comprehensive purity profiling for gamma-retroviral vectors, focusing on residual host cell proteins and replication-competent retrovirus (RCR) testing.

Oncolytic Viruses (OVs)

Targeted analysis ensuring oncolytic potency and purity for viruses such as Vaccinia and Reovirus.

mRNA-Lipid Nanoparticles (LNPs)

Impurity analysis including non-encapsulated mRNA, residual organic solvents, and lipid oxidation products.

Herpes Simplex Virus (HSV)

Sophisticated purity assessment for large-genome HSV vectors, ensuring low levels of adventitious agents and process residues.

Service Workflow

1

Consultation & Sample Submission

The process begins with an in-depth technical consultation where our experts evaluate your viral vector type, production platform (e.g., HEK293, Sf9), and current development stage. Clients then submit samples along with detailed process information, such as sample matrix and initial concentration estimates, to ensure optimal assay selection.

  • Technical feasibility assessment
  • Customized testing panel design
2

Method Qualification & Laboratory Analysis

For samples with complex matrices, our team performs rigorous method qualification or optimization to eliminate interference. Using advanced orthogonal technologies—such as AUC for capsid loading and LC-MS/MS for proteomics—we conduct systematic testing with appropriate negative and positive controls to ensure high sensitivity and reproducibility.

AUC Analysis ELISA / qPCR SEC-MALS
3

Data Interpretation & Final Reporting

All raw data is meticulously analyzed by our dedicated Quality Control (QC) team. We deliver a comprehensive, multi-layered report that includes raw chromatograms, high-resolution images, detailed impurity calculations, and a formal Certificate of Analysis (CoA) suitable for regulatory submission.

  • Deliverables: Comprehensive analysis report, raw data package, and CoA.
  • Why Choose Our Services?

    01

    Advanced Analytics

    We utilize gold-standard orthogonal technologies like AUC, SEC-MALS, and LC-MS/MS for high-resolution impurity profiling and comprehensive structural characterization of viral vectors.

    02

    Customized Solutions

    Our modular assay panels and process-specific validation strategies are tailored to your unique production platform, serotypes, and specific viral delivery systems.

    03

    Regulatory Support

    We deliver detailed analytical reports and CoA compliant with international standards, facilitating your IND, BLA, or MAA filings with robust data.

    04

    Expert Consultation

    Direct access to our **PhD-level technical support team** ensures decades of expertise in viral vector biophysics and impurity management are at your disposal.

    Broad Applications of Purity Detection

    Ensuring viral vector purity is essential throughout the biopharmaceutical lifecycle, from early discovery and vector engineering to manufacturing scale-up and regulatory approval.

    Preclinical Research & Selection

    Purity data is vital for accurate dose-response modeling. Removing empty capsids and HCPs ensures that biological observations are attributed to the transgene rather than impurities.

    • Normalizing viral genome (vg) titers
    • Reducing background interference

    CMC & Process Optimization

    Acts as a critical feedback loop for downstream process (DSP) development, enabling the iterative improvement of chromatography steps and filtration efficiency.

    • Monitoring HCP/HCD clearance
    • Refining elution gradients

    Regulatory & Batch Release

    Provides the high-resolution characterization data required for IND and BLA submissions, ensuring that product variants are within strictly defined specification limits.

    • Supporting CoA generation
    • Lot-to-lot consistency data

    Scale-up & Tech Transfer

    Ensures that moving from lab-scale to large bioreactors (50L-2000L) does not compromise the purity profile or introduce novel host-derived contaminants.

    • Bridging study support
    • Site-to-site comparability

    Vector Design Validation

    Confirms that novel capsid modifications or payload designs do not negatively impact "packability," capsid integrity, or the aggregation propensity of the vector.

    • Assessing capsid stoichiometry
    • Payload-to-capsid compatibility

    Stability & Shelf-Life Assessment

    Monitoring the purity profile over time under various conditions to identify aggregation events, capsid degradation, or titer loss during storage.

    • Accelerated aging studies
    • Freeze-thaw stability profiling

    Raw Material Qualification

    Ensuring that starting materials such as helper plasmids and media components do not introduce biological or chemical impurities into the process.

    • Plasmid purity verification
    • Screening for media residues

    Platform Characterization

    Conducting side-by-side comparisons of different production systems (e.g., HEK293 vs. Sf9) to determine which yields the best purity profile.

    • Host cell line profiling
    • Comparing serotype recovery rates

    Client Testimonials

    Client 1

    Dr. H. Lee

    Director of CMC

    "The AUC data provided by Creative Biolabs gave us definitive proof of our downstream purification efficiency. Their ability to accurately quantify empty vs. full capsids was pivotal for our FDA IND submission."
    Client 2

    Sarah M.

    Senior Scientist

    "We struggled with consistent HCP detection using generic kits. Creative Biolabs developed a process-specific ELISA for our HEK293 platform that drastically improved our impurity tracking. Highly recommended."

    Frequently Asked Questions

    Standard Analytical Ultracentrifugation (AUC) protocols typically require a minimum volume of 400 µL with a concentration exceeding 1E12 vg/mL to ensure optimal signal-to-noise ratios during sedimentation. For projects with limited material, we offer specialized low-volume centerpieces that can accommodate scarcer samples while maintaining high data resolution across various viral serotypes and formulations.
    Our sedimentation velocity Analytical Ultracentrifugation (SV-AUC) is specifically designed to resolve complex viral populations including empty, partially filled, and full capsids based on their unique sedimentation coefficients. This orthogonal approach provides a matrix-free and serotype-independent quantification of packaging efficiency, allowing developers to precisely monitor product variants that directly impact gene therapy potency and safety profiles.
    We utilize highly sensitive qPCR and Droplet Digital PCR (ddPCR) platforms to quantify residual host cell DNA (HCD) with a limit of detection reaching picogram levels per dose. These assays are validated to ensure that process-derived DNA impurities remain well below the 10 ng/dose threshold recommended by global regulatory agencies, thereby minimizing the risks associated with potential oncogenic integration or adverse immune responses.
    Our analytical suite supports a diverse range of delivery systems including all major AAV serotypes, Lentivirus (LV), and Adenoviral (AdV) vectors, as well as more specialized platforms like Herpes Simplex Virus (HSV) and Oncolytic Viruses. Furthermore, we provide impurity profiling for advanced non-viral delivery agents such as mRNA-Lipid Nanoparticles (LNPs), ensuring comprehensive purity detection across the entire spectrum of modern gene and cell therapy modalities.
    Recognizing that every production process is unique, our experts perform rigorous method qualification for complex matrices to identify and eliminate potential interference from detergents, transfection reagents, or host cell components. We employ customized sample preparation steps and orthogonal testing panels to guarantee that our purity results are accurate, reproducible, and fully reflective of the final drug product's quality across different manufacturing platforms.

    Connect with Us for Viral Vector Quality Control

    Creative Biolabs provides robust purity detection solutions to accelerate your gene therapy program. Contact us today to discuss your testing needs and receive a customized proposal.

    Our technical support team is available 24 hours a day!

    Start Your Project Today

    Tell us about your project, and our experts will get back to you with a customized quote and proposal.