Services Support
Online inquiry

For Research Use Only. Not For Clinical Use.

Contact us
  • Email:

Pluripotency Marker Analysis Service via Immunofluorescence (IF) Assay

Introduction Pluripotency Marker Assay Workflow What We Can Offer Case Study Customer Reviews FAQs Related Sections

Introduction

Pluripotency marker assays are critical for regenerative medicine, ensuring iPSC trilineage differentiation capacity and mitigating teratoma risks. Creative Biolabs' service uses multi-omic validation, flow cytometry, and immunocytochemistry to deliver quantified marker data. It meets gold standards, streamlines IND paths, and provides definitive project guidance for reliable, compliant iPSC characterization.

Discover How We Can Help - Request a Consultation

Pluripotency Marker Assay of iPSC

Pluripotency marker assay of induced pluripotent stem cells (iPSCs) is a core quality control method for verifying the pluripotent state of iPSCs. Through a multi-dimensional experimental strategy, it accurately evaluates the undifferentiated characteristics, self-renewal capacity, and differentiation potential of cells, providing critical data support for iPSC line establishment, subculture, and application.

The pluripotency of iPSCs was identified by using multiple methods. (OA Literature)Fig.1 Utilize multiple methods to identify the pluripotency of iPSCs.1,3

Core Detection Markers

Focusing on core transcription factors and specific genes that regulate stem cell pluripotency, common detection targets include:

  1. Core Transcription Factors: OCT4 (POU5F1), SOX2, NANOG. These three form a regulatory network to maintain the undifferentiated state of cells and serve as core indicators for pluripotency determination.
  2. Auxiliary Markers: LIN28A, ESRG, LINC00678. Enhance detection specificity, especially suitable for trace screening of residual pluripotent cells.
  3. Surface Antigens: SSEA-4, TRA-1-60, TRA-1-81. Commonly used for phenotypic identification via flow cytometry or immunofluorescence.

Mainstream Detection Methods and Characteristics

Detection Method Core Advantages Application Scenarios
qPCR/ddPCR High quantitative accuracy and sensitivity, capable of detecting 0.001% of residual pluripotent cells Quantification of gene expression levels, quality control screening
Immunofluorescence Staining Direct visualization of protein expression and spatial distribution of cellular pluripotency Single clone selection, morphological validation
Flow Cytometry High-throughput detection, enabling simultaneous analysis of multiple surface markers Phenotypic identification of large-scale cell populations
Western Blot Verification of protein molecular weight and specificity Qualitative/semi-quantitative analysis at the protein level

Key Application Values

  1. Reprogramming Efficiency Validation: Determine whether somatic cells are successfully reprogrammed into iPSCs. High expression of pluripotency markers is a core sign of successful reprogramming.
  2. Long-term Culture Quality Control: Monitor the stability of cellular pluripotency during subculture and timely alert to the risks of cell differentiation or genomic drift.
  3. Clinical-grade Cell Certification: Meet the declaration requirements for cell therapy products and provide compliant pluripotency detection data.

Workflow

Our standardized workflow is designed for maximum transparency and scientific rigor, transitioning seamlessly from sample receipt to a detailed analytical dossier.

What We Can Offer

As a global leader in stem cell solutions, Creative Biolabs provides highly customized Pluripotency Marker Analysis Service via Immunofluorescence (IF) Assay tailored to the specific genetic background and therapeutic goals of your cell lines. We don't just provide data; we provide a biological roadmap for your project. Our offerings include:

One-stop characterization service

from initial reprogramming validation to pilot and large-scale bank certification.

Highly customized assay panels

tailored to specific cell types, allowing for the addition of niche markers or tissue-specific lineage indicators.

Integration of Quality-by-Design (QbD)

principles to ensure your pluripotency data meets stringent regulatory expectations for IND filings.

Advanced multi-omic validation

including simultaneous assessment of surface markers, intracellular proteins, and mRNA expression profiles.

Strict aseptic and GMP-compliant protocols

are maintained throughout the cell expansion and analytical phases to prevent cross-contamination.

Optimization of culture conditions

for specific clones to maximize the expression of key pluripotency factors before differentiation.

Detailed documentation and assessment

of cell origin and passage history, approved by our internal qualified quality assurance service.

Experience the Creative Biolabs Advantage - Get a Quote Today

Case Study

Induced pluripotent stem cell lines (iPSCs) are generated from human peripheral blood mononuclear cells (PBMCs) via adenovirus-mediated reprogramming. On the 9th day post-reprogramming, the cells form tightly packed, dome-shaped colonies with distinct boundaries, and their morphology remains stable following 5 passages. With GAPDH as the internal reference gene, quantitative PCR analysis of the pluripotency markers OCT4, SOX2, NANOG, and KLF4 revealed that their expression levels in the generated iPSCs were comparable to those of embryonic stem cells. Furthermore, multiplex immunofluorescence staining and flow cytometry assays were performed to confirm the co-expression of pluripotency and proliferation markers in these cells.

The pluripotency of iPSC was identified by flow cytometry, immunofluorescence and rt-PCR. (OA Literature)Fig.2 The pluripotency of iPSCs derived from peripheral blood mononuclear cells (PBMCs) was verified using techniques such as flow cytometry, immunofluorescence, and qPCR.2,3

Customer Reviews

FAQs

Q: How do you distinguish between partial and full reprogramming?

A: We utilize a combination of surface markers (TRA-1-60) and core transcription factors (NANOG). Partial clones often express early markers like SSEA-4 but fail to activate the endogenous NANOG circuitry required for stable pluripotency.

Q: Can these assays be used for MSCs or only iPSCs?

A: While this specific panel is optimized for iPSCs/ESCs, we offer specialized mesenchymal stem cell (MSC) characterization panels following ISCT guidelines, including CD73, CD90, and CD105 markers.

Q: What is the sensitivity of your residual undifferentiated cell detection?

A: Our high-sensitivity Flow Cytometry protocols can detect undifferentiated cells at a level of 0.01% or lower, which is critical for safety assessments in cell therapy products.

Q: Do you provide genomic stability testing alongside marker assays?

A: Yes, we strongly recommend pairing marker assays with karyotyping or G-banding to ensure that the reprogramming process has not introduced chromosomal abnormalities.

Q: How are the results reported for regulatory purposes?

A: All results are compiled into a formal technical report that includes methodology, raw data, representative images, and a summary of findings aligned with GLP-like standards.

Creative Biolabs offers an end-to-end solution for Pluripotency Marker Analysis Service via Immunofluorescence (IF) Assay, providing the precision, scalability, and documentation necessary for modern regenerative medicine. From early-stage discovery to large-scale allogeneic manufacturing, our expertise ensures your cell lines are validated, stable, and ready for clinical application.

Contact Our Team for More Information and to Discuss Your Project

Related Sections

References

  1. Novoa, Juan, et al. "Validating human induced pluripotent stem cell-specific quality control tests for the release of an intermediate drug product in a Good Manufacturing Practice quality system." Cytotherapy 26.9 (2024): 1105-1117. https://doi.org/10.1016/j.jcyt.2024.04.004.
  2. Chen, Yuanyuan, et al. "Generation and validation of a iPSC line from a healthy female donor using integration-free Sendai virus reprogramming." Stem Cell Research (2025): 103844. https://doi.org/10.1016/j.scr.2025.103844.
  3. Distributed under Open Access license CC BY 4.0, without modification.

For Research Use Only. Not For Clinical Use.